Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine nucleotide hydrolase nude | ALO56_00125 | P45799 | Positive | 2187502 - 2188083 | 21593.0 |
| 3',5'-bisphosphate nucleotidase | ALO56_00126 | Q8FAG5 | Positive | 2188080 - 2188922 | 30186.8 |
| pts system fructose-specific transporter subunits iibc | ALO56_00282 | Q9KM72 | Negative | 2189235 - 2190977 | 59846.8 |
| phosphofructokinase | ALO56_00283 | Q9KM71 | Negative | 2190990 - 2191931 | 32785.6 |
| multifunctional pts system fructose-like transporter subunit iia/phosphocarrier protein hpr/phosphoenolpyruvate-protein phosphotransferase | ALO56_04400 | P23388 | Negative | 2191931 - 2194801 | 102330.0 |
| dna-binding transcriptional regulator frur | ALO56_04401 | Q9KM69 | Positive | 2195141 - 2196136 | 36514.8 |
| tatd family hydrolase | ALO56_00285 | P39408 | Positive | 2196139 - 2196921 | 29335.2 |
| ampe protein | ALO56_00286 | Not Available | Negative | 2196929 - 2197765 | 30588.0 |
| n-acetyl-anhydromuranmyl-l-alanine amidase | ALO56_00287 | P82973 | Negative | 2197781 - 2198329 | 20258.6 |
| uncharacterized protein | ALO56_04402 | Not Available | Negative | 2198495 - 2200816 | 86346.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









