Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00116 | Not Available | Negative | 2175673 - 2175939 | 9933.01 |
| dna-binding response regulator qseb | ALO56_00117 | Not Available | Positive | 2176110 - 2176772 | 24780.1 |
| sensor histidine kinase qsec | ALO56_00118 | Q8GP19 | Positive | 2176769 - 2178142 | 50734.0 |
| uncharacterized protein | ALO56_00119 | P44732 | Negative | 2178152 - 2179438 | 45554.0 |
| aldehyde dehydrogenase | ALO56_00120 | P46562 | Negative | 2179463 - 2180953 | 53353.7 |
| 4-aminobutyrate aminotransferase | ALO56_00121 | Q88RB9 | Positive | 2181201 - 2182448 | 44463.8 |
| uncharacterized protein | ALO56_00122 | P76097 | Positive | 2182494 - 2183876 | 51304.8 |
| uncharacterized protein | ALO56_00123 | Not Available | Positive | 2184474 - 2185802 | 46317.9 |
| hypothetical protein | ALO56_200215 | Not Available | Positive | 2185934 - 2186638 | 26509.9 |
| had superfamily hydrolase | ALO56_00124 | P64636 | Negative | 2186755 - 2187417 | 25389.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









