Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00108 | Not Available | Positive | 2161816 - 2165601 | 138900.0 |
| hypothetical protein | ALO56_101201 | Not Available | Positive | 2166113 - 2166652 | 21893.9 |
| bacteriophytochrome histidine kinase | ALO56_04355 | P23545 | Negative | 2166706 - 2167320 | 22246.7 |
| bacteriophytochrome heme oxygenase bpho | ALO56_00109 | Not Available | Negative | 2168940 - 2169554 | 22460.0 |
| metal transporter | ALO56_00110 | Q8ZQT3 | Negative | 2169750 - 2170703 | 33787.8 |
| uncharacterized protein | ALO56_00111 | P55757 | Negative | 2170729 - 2171004 | 10113.1 |
| sulfatase family protein | ALO56_04357 | Not Available | Negative | 2171103 - 2173244 | 80017.7 |
| membrane protein | ALO56_00113 | Not Available | Negative | 2173147 - 2173767 | 22506.5 |
| bnr/asp-box repeat-containing protein | ALO56_00114 | Not Available | Negative | 2173764 - 2175062 | 47416.9 |
| cytochrome family protein | ALO56_00115 | Not Available | Negative | 2175128 - 2175673 | 20569.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









