Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar m-ring protein | ALO56_00057 | Q51463 | Negative | 2101311 - 2103092 | 63110.8 |
| flagellar hook-basal body complex protein flie | ALO56_00058 | Q884X9 | Negative | 2103108 - 2103437 | 11674.1 |
| fis family transcriptional regulator | ALO56_04342 | Q9I4N3 | Negative | 2103691 - 2105274 | 57226.2 |
| flagellar sensor histidine kinase fles | ALO56_00060 | Q9I4N4 | Negative | 2105106 - 2106320 | 43984.9 |
| transcriptional regulator fleq | ALO56_00061 | G3XCV0 | Negative | 2106443 - 2107918 | 55389.8 |
| motility-like protein flit | ALO56_00062 | Not Available | Negative | 2108097 - 2108393 | 10807.8 |
| flagellar protein flis | ALO56_00063 | Q9I4N6 | Negative | 2108422 - 2108817 | 14467.6 |
| flagellar hook-associated 2 domain-containing protein | ALO56_00064 | O33421 | Negative | 2108947 - 2110407 | 49316.4 |
| flagellin flag | ALO56_00065 | Not Available | Negative | 2110487 - 2110888 | 14543.3 |
| flagellin | ALO56_00066 | P21184 | Negative | 2110952 - 2111800 | 29174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









