Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor flia | ALO56_00037 | P29248 | Negative | 2082480 - 2083220 | 27549.4 |
| site-determining protein | ALO56_00038 | G3XD64 | Negative | 2083217 - 2084050 | 29753.3 |
| flagellar biosynthesis regulator flhf | ALO56_04338 | O52256 | Negative | 2084166 - 2085494 | 48256.4 |
| flagellar biosynthesis protein flha | ALO56_04339 | Q51910 | Negative | 2085506 - 2087692 | 78145.9 |
| flagellar biosynthesis protein flhb | ALO56_00041 | P76299 | Negative | 2087834 - 2088970 | 41783.6 |
| flagellar biosynthetic protein flir | ALO56_00042 | P54702 | Negative | 2088972 - 2089757 | 28077.9 |
| flagellar biosynthesis protein fliq | ALO56_00043 | Q8KA36 | Negative | 2089764 - 2090033 | 9912.81 |
| flagellar biosynthesis protein flip | ALO56_00044 | Q51468 | Negative | 2090059 - 2090811 | 27171.7 |
| flagellar protein flio | ALO56_00045 | Q51467 | Negative | 2090811 - 2091248 | 15637.7 |
| flagellar motor switch protein | ALO56_00046 | Q51466 | Negative | 2091249 - 2091710 | 16238.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









