Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00447 | Q9ZC85 | Positive | 122572 - 123000 | 16560.9 |
| uncharacterized protein | ALO56_00448 | Not Available | Positive | 123106 - 124005 | 32426.1 |
| hit family hydrolase | ALO56_00449 | P62958 | Positive | 124930 - 125268 | 12729.5 |
| 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ALO56_00450 | Q889Z8 | Positive | 125379 - 126032 | 23977.8 |
| s-adenosylmethionine decarboxylase proenzyme | ALO56_04427 | Q48NP3 | Negative | 126111 - 126950 | 31962.8 |
| osmc-like protein | ALO56_00452 | P0ADX3 | Negative | 127149 - 127571 | 15132.4 |
| dna-binding transcriptional dual regulator crp | ALO56_00453 | P55222 | Positive | 127783 - 128427 | 23872.9 |
| uncharacterized protein | ALO56_04428 | Q5KUD7 | Negative | 128440 - 129165 | 26525.7 |
| indole-3-glycerol phosphate synthase | ALO56_00455 | Q88A03 | Negative | 129166 - 130002 | 30270.5 |
| anthranilate phosphoribosyltransferase | ALO56_00456 | Q4ZML2 | Negative | 129999 - 131060 | 37633.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









