Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00027 | Not Available | Negative | 2073165 - 2073566 | 14607.8 |
| chemotaxis protein chew | ALO56_00028 | Q52881 | Negative | 2073567 - 2074046 | 17626.0 |
| chemotaxis protein chew | ALO56_04335 | Not Available | Negative | 2074103 - 2075005 | 32567.5 |
| para family protein | ALO56_04336 | P37522 | Negative | 2075069 - 2075983 | 33530.8 |
| flagellar motor protein motd | ALO56_00031 | P46827 | Negative | 2075901 - 2076788 | 32119.0 |
| flagellar motor protein | ALO56_00032 | P28611 | Negative | 2076795 - 2077535 | 26044.3 |
| chemotaxis response regulator protein-glutamate methylesterase | ALO56_00033 | Q4ZQV7 | Negative | 2077535 - 2078707 | 41220.0 |
| chemotaxis sensor histidine kinase chea | ALO56_04337 | O25153 | Negative | 2078759 - 2081029 | 80185.9 |
| protein phosphatase chez | ALO56_00035 | Q88EW3 | Negative | 2081045 - 2081830 | 29406.5 |
| chemotaxis protein chey | ALO56_00036 | Q51455 | Negative | 2081850 - 2082248 | 14904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









