Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease vapc | ALO56_00017 | Not Available | Positive | 2063828 - 2064280 | 16603.0 |
| 4fe-4s ferredoxin | ALO56_00018 | P18396 | Positive | 2064305 - 2065720 | 53524.8 |
| uncharacterized protein | ALO56_00019 | Not Available | Positive | 2065731 - 2066270 | 20052.8 |
| copper-translocating p-type atpase | ALO56_00020 | P9WPU0 | Positive | 2066272 - 2068725 | 88068.0 |
| protein ccos | ALO56_00021 | Not Available | Positive | 2068704 - 2068922 | 7790.08 |
| uncharacterized protein | ALO56_00022 | Not Available | Positive | 2068931 - 2069614 | 24402.8 |
| coproporphyrinogen-iii oxidase | ALO56_00023 | P77915 | Positive | 2069714 - 2071102 | 52805.4 |
| uncharacterized protein | ALO56_00024 | Not Available | Negative | 2071117 - 2071584 | 16221.6 |
| cyclic nucleotide-binding protein | ALO56_00025 | O85222 | Positive | 2071733 - 2072470 | 27332.0 |
| adenine phosphoribosyltransferase | ALO56_00026 | Q48GH3 | Positive | 2072534 - 2073082 | 20086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









