Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00007 | Not Available | Positive | 2050789 - 2051316 | 19624.2 |
| outer membrane autotransporter barrel | ALO56_04334 | D2TV88 | Negative | 2051384 - 2053579 | 77968.8 |
| uncharacterized protein | ALO56_00009 | Not Available | Positive | 2053886 - 2055718 | 66730.3 |
| uncharacterized protein | ALO56_00010 | Not Available | Positive | 2055759 - 2058704 | 105239.0 |
| uncharacterized protein | ALO56_00011 | Not Available | Positive | 2058808 - 2059266 | 17318.8 |
| cbb3-type cytochrome c oxidase subunit i | ALO56_00012 | D9IA43 | Positive | 2060225 - 2061667 | 53672.0 |
| cbb3-type cytochrome c oxidase subunit ii | ALO56_00013 | Not Available | Positive | 2061667 - 2062275 | 22344.0 |
| cytochrome c oxidase, cbb3-type subunit iv | ALO56_00014 | Not Available | Positive | 2062278 - 2062472 | 6988.56 |
| cbb3-type cytochrome c oxidase subunit | ALO56_00015 | Q8KS19 | Positive | 2062469 - 2063446 | 35599.3 |
| prevent-host-death family protein | ALO56_00016 | Not Available | Positive | 2063583 - 2063828 | 8723.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









