Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | ALO56_01497 | P76185 | Positive | 2039173 - 2040027 | 31831.2 |
| glutaredoxin | ALO56_01726 | Not Available | Negative | 2040224 - 2040574 | 13049.0 |
| nucleoid-associated protein | ALO56_01727 | Q4ZXI3 | Negative | 2040580 - 2041581 | 37505.2 |
| hu family dna-binding protein | ALO56_01728 | P28080 | Positive | 2041976 - 2042257 | 9789.92 |
| sulfurtransferase tusa -like protein | ALO56_00001 | Q48KQ4 | Negative | 2042507 - 2042761 | 9293.29 |
| ribosomal rna large subunit methyltransferase m | ALO56_00002 | Q4ZQY7 | Negative | 2042812 - 2043894 | 40689.3 |
| aconitate hydratase 1 | ALO56_00003 | Q9I3F5 | Positive | 2043951 - 2046827 | 104346.0 |
| caax amino terminal protease family protein | ALO56_00004 | Not Available | Positive | 2046939 - 2047730 | 28291.5 |
| aerotaxis receptor | ALO56_00005 | Not Available | Positive | 2047829 - 2049394 | 57089.4 |
| uncharacterized protein | ALO56_00006 | Not Available | Positive | 2049700 - 2050365 | 24233.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









