Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | ALO56_01488 | Not Available | Negative | 2028137 - 2028643 | 18710.6 |
| uncharacterized protein | ALO56_01489 | Not Available | Positive | 2028740 - 2029156 | 14653.2 |
| putative iron-regulated membrane protein | ALO56_101035 | Not Available | Positive | 2029177 - 2030727 | 56979.5 |
| arac family transcriptional regulator | ALO56_01490 | Not Available | Negative | 2031053 - 2031931 | 32700.1 |
| membrane protein | ALO56_01491 | Not Available | Positive | 2032068 - 2032979 | 32716.1 |
| d-isomer specific 2-hydroxyacid dehydrogenase | ALO56_01492 | A8G7S7 | Negative | 2033074 - 2034048 | 35464.6 |
| regulatory protein lysr | ALO56_01493 | Not Available | Negative | 2034137 - 2035084 | 34565.5 |
| outer membrane efflux protein | ALO56_01494 | P24126 | Positive | 2035282 - 2036772 | 53435.7 |
| fusaric acid resistance protein | ALO56_01495 | P24128 | Positive | 2036774 - 2038960 | 81377.4 |
| uncharacterized protein | ALO56_01496 | Not Available | Positive | 2038950 - 2039150 | 7606.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









