Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00546 | Not Available | Positive | 2016924 - 2018726 | 66745.7 |
| threonine efflux protein | ALO56_00547 | Q8Z3B3 | Positive | 2018741 - 2019385 | 22830.7 |
| alcohol dehydrogenase | ALO56_00548 | Q59104 | Positive | 2019403 - 2020557 | 41118.5 |
| beta-lactamase | ALO56_00549 | Q9KX40 | Positive | 2020561 - 2021700 | 40327.1 |
| transcriptional activator ftra | ALO56_00550 | O87389 | Negative | 2021764 - 2022717 | 34999.1 |
| thij/pfpi | ALO56_04444 | A0A0H2ZIC3 | Positive | 2022802 - 2023455 | 23809.2 |
| regulatory protein lysr | ALO56_00552 | Not Available | Positive | 2023755 - 2024003 | 9117.08 |
| uncharacterized protein | ALO56_00553 | Not Available | Positive | 2024000 - 2024620 | 23147.9 |
| glycosidase | ALO56_00554 | Not Available | Positive | 2024815 - 2026881 | 76042.5 |
| regulatory protein | ALO56_01487 | Not Available | Negative | 2027163 - 2028140 | 35356.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









