Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter permease | ALO56_00537 | P37731 | Negative | 2004257 - 2004937 | 23960.9 |
| tetr family transcriptional regulator | ALO56_04441 | Q3J6K8 | Positive | 2005742 - 2006572 | 31413.7 |
| alcohol dehydrogenase | ALO56_00539 | Q3J6K9 | Positive | 2006607 - 2007614 | 35192.6 |
| site-specific recombinase, phage integrase family protein | ALO56_100169 | Q7ZAJ5 | Positive | 2007988 - 2009001 | 38264.9 |
| uncharacterized protein | ALO56_00540 | Not Available | Positive | 2009512 - 2009904 | 14855.4 |
| methionyl-trna ligase | ALO56_00541 | Q9HJ12 | Positive | 2009897 - 2011396 | 55724.1 |
| fad dependent oxidoreductase | ALO56_00542 | Not Available | Positive | 2011411 - 2012553 | 41013.1 |
| extracellular ligand-binding receptor | ALO56_00543 | Not Available | Positive | 2012550 - 2013527 | 35645.2 |
| lysine n6-hydroxylase/l-ornithine n5-oxygenase | ALO56_00544 | O51940 | Positive | 2013581 - 2014903 | 49204.0 |
| pyridoxal-5'-phosphate-dependent enzyme subunit beta:ornithine cyclodeaminase/mu-crystallin | ALO56_00545 | Q99X99 | Positive | 2014909 - 2016918 | 73009.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









