Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00528 | Not Available | Positive | 1997342 - 1997545 | 7120.67 |
| uncharacterized protein | ALO56_00529 | Not Available | Negative | 1997600 - 1997839 | 8373.3 |
| nadp oxidoreductase, coenzyme -dependent | ALO56_00530 | Not Available | Negative | 1997880 - 1998614 | 25863.6 |
| uncharacterized protein | ALO56_00531 | Not Available | Negative | 1999263 - 1999664 | 15279.8 |
| uncharacterized protein | ALO56_00532 | Not Available | Positive | 1999944 - 2000387 | 17039.7 |
| unknown protein sequence | ALO56_00533 | Not Available | Negative | 2000681 - 2000845 | 5853.93 |
| Trna-leu | Not Available | Not Available | Positive | 2001079 - 2001164 | Not Available |
| dna-binding protein | ALO56_00534 | Not Available | Positive | 2001585 - 2001995 | 14905.7 |
| dna topoisomerase | ALO56_00535 | Q7T6X9 | Negative | 2002021 - 2003076 | 39747.9 |
| molybdenum import atp-binding protein modc | ALO56_00536 | Q48J29 | Negative | 2003165 - 2004253 | 39867.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









