Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00520 | Not Available | Negative | 1988544 - 1988783 | 8865.1 |
| uncharacterized protein | ALO56_00521 | Not Available | Positive | 1989006 - 1989632 | 22927.7 |
| uncharacterized protein | ALO56_04440 | Not Available | Negative | 1989925 - 1991247 | 47782.0 |
| hypothetical protein | ALO56_200019 | Not Available | Negative | 1991600 - 1992931 | 49075.5 |
| uncharacterized protein | ALO56_00523 | Not Available | Positive | 1993187 - 1993371 | 6506.63 |
| uncharacterized protein | ALO56_00524 | Q8P8Y5 | Positive | 1993492 - 1995213 | 62017.9 |
| Trna-cys | Not Available | Not Available | Positive | 1995350 - 1995423 | Not Available |
| hypothetical protein | ALO56_00525 | Q8EHY2 | Positive | 1995816 - 1996463 | 24489.5 |
| uncharacterized protein | ALO56_00526 | Not Available | Negative | 1996465 - 1996734 | 10521.5 |
| uncharacterized protein | ALO56_00527 | Not Available | Negative | 1996872 - 1997078 | 7292.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









