Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200007 | P26402 | Positive | 110630 - 111745 | 41610.5 |
| hypothetical protein | ALO56_200014 | Not Available | Positive | 111819 - 113039 | 44880.1 |
| hypothetical protein | ALO56_200148 | P71241 | Positive | 113052 - 114461 | 53612.7 |
| hypothetical protein | ALO56_200056 | Q46629 | Positive | 114625 - 115713 | 39092.6 |
| hypothetical protein | ALO56_200147 | O85762 | Positive | 116083 - 116664 | 20852.2 |
| tyrosine--trna ligase | ALO56_00444 | Q48NN3 | Negative | 116902 - 118113 | 44549.8 |
| m24/m37 family peptidase | ALO56_100025 | P44693 | Positive | 118218 - 119744 | 55500.1 |
| anhydro-n-acetylmuramic acid kinase | ALO56_00445 | Q48NN5 | Positive | 119748 - 120842 | 39299.0 |
| putative iron binding protein from the family | ALO56_100096 | Q48NN6 | Negative | 120918 - 121268 | 12448.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | ALO56_00446 | Q48NN7 | Negative | 121404 - 122438 | 36589.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









