Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation | ALO56_04767 | Not Available | Negative | 1955765 - 1965265 | 348853.0 |
| regulatory protein luxr | ALO56_01913 | Not Available | Positive | 1965601 - 1966365 | 27347.9 |
| extracellular solute-binding protein | ALO56_100120 | A1A968 | Negative | 1966558 - 1968072 | 55999.9 |
| oligopeptide/dipeptide abc transporter atp-binding protein-like protein | ALO56_04437 | Not Available | Negative | 1968120 - 1969244 | 40622.7 |
| peptide abc transporter atp-binding protein | ALO56_00506 | Not Available | Negative | 1969097 - 1970101 | 36176.0 |
| peptide abc transporter permease | ALO56_00507 | P94312 | Negative | 1970098 - 1970961 | 31358.3 |
| peptide abc transporter permease | ALO56_00508 | Not Available | Negative | 1970958 - 1971905 | 34560.7 |
| luxr family transcriptional regulator | ALO56_00509 | A0A0N8YGA2 | Positive | 1972192 - 1972956 | 28433.1 |
| peptidase s33, tricorn interacting factor 1 | ALO56_04438 | C3K630 | Positive | 1973029 - 1973967 | 35196.6 |
| methyl-accepting chemotaxis protein | ALO56_00511 | Not Available | Positive | 1974338 - 1975963 | 58351.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









