Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-rna polymerase sigma 70 factor | ALO56_03919 | P15275 | Negative | 1942786 - 1943286 | 18619.0 |
| disulfide bond formation protein b | ALO56_03920 | Q500P0 | Negative | 1943432 - 1943947 | 18505.8 |
| putative hemy protein | ALO56_100008 | Not Available | Negative | 1944178 - 1945422 | 46689.2 |
| uroporphyrin-iii c-methyltransferase | ALO56_03921 | Not Available | Negative | 1945419 - 1946537 | 40536.7 |
| uroporphyrinogen-iii synthase | ALO56_03922 | P48246 | Negative | 1946589 - 1947365 | 27925.7 |
| porphobilinogen deaminase | ALO56_03923 | Q500N6 | Negative | 1947362 - 1948303 | 33517.4 |
| argininosuccinate lyase | ALO56_05140 | Q48QD3 | Positive | 1950425 - 1951885 | 54078.8 |
| d-mannonate oxidoreductase | ALO56_01804 | Not Available | Positive | 1952066 - 1952353 | 10205.3 |
| xylulokinase | ALO56_01805 | P44401 | Positive | 1952363 - 1953844 | 52601.7 |
| non-ribosomal peptide synthetase syfb | ALO56_04760 | P9WER8 | Negative | 1953991 - 1955768 | 64961.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









