Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | ALO56_03893 | P44905 | Positive | 1909241 - 1909852 | 23736.1 |
| uncharacterized protein | ALO56_03894 | Not Available | Negative | 1909919 - 1910071 | 5750.11 |
| uncharacterized protein | ALO56_03895 | Q9P016 | Positive | 1910255 - 1910704 | 16754.9 |
| putative flagellar protein flil | ALO56_100006 | Not Available | Negative | 1910711 - 1911160 | 16514.0 |
| oxidoreductase zinc-binding protein | ALO56_03896 | A7RK30 | Positive | 1911258 - 1912235 | 34197.3 |
| sn-glycerol-3-phosphate transporter | ALO56_03897 | P08194 | Positive | 1913089 - 1914438 | 49860.1 |
| chac-related protein | ALO56_03898 | Q8R3J5 | Negative | 1914440 - 1915108 | 24919.8 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | ALO56_100014 | Q66DP5 | Negative | 1915316 - 1916284 | 35437.4 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | ALO56_03899 | Q4ZZP7 | Negative | 1916284 - 1917750 | 54582.2 |
| transcription termination factor rho | ALO56_03900 | P52155 | Negative | 1917880 - 1919139 | 47017.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









