Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prka family serine protein kinase | ALO56_01177 | P0ACY5 | Positive | 1897456 - 1899378 | 73600.4 |
| hypothetical protein | ALO56_01178 | Q48NU2 | Positive | 1899515 - 1900786 | 48772.9 |
| spovr family protein | ALO56_01179 | P29013 | Positive | 1900783 - 1902345 | 61148.3 |
| multifunctional cca protein | ALO56_01180 | Q88A53 | Positive | 1902442 - 1903674 | 46060.2 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ALO56_03887 | P25535 | Negative | 1903830 - 1905107 | 46122.3 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | ALO56_03888 | P25534 | Negative | 1905100 - 1906287 | 43141.5 |
| peptidase m24 | ALO56_03889 | P15034 | Negative | 1906284 - 1907624 | 49411.1 |
| hypothetical protein | ALO56_03890 | Q48PR0 | Negative | 1907690 - 1908244 | 19671.2 |
| uncharacterized protein | ALO56_03891 | Not Available | Positive | 1908394 - 1908603 | 8141.86 |
| uncharacterized protein | ALO56_03892 | Q9HTW3 | Positive | 1908600 - 1908929 | 11893.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









