Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box histidine kinase | ALO56_01169 | O32198 | Negative | 1883552 - 1885567 | 74941.6 |
| dnaj-like protein djla | ALO56_101059 | Q8FL94 | Negative | 1886946 - 1887713 | 28172.2 |
| nucleotidyltransferase | ALO56_01170 | Q88QT2 | Negative | 1887710 - 1888384 | 24590.4 |
| uncharacterized protein | ALO56_01171 | Q88QT3 | Negative | 1888426 - 1889451 | 38880.7 |
| lps-assembly protein lptd | ALO56_01172 | Q4ZMG8 | Positive | 1889581 - 1892361 | 104771.0 |
| survival protein sura precursor | ALO56_100135 | Q4ZMG7 | Positive | 1892333 - 1893664 | 49065.6 |
| ribosomal rna small subunit methyltransferase a | ALO56_04585 | Q88A46 | Positive | 1894164 - 1895453 | 47654.0 |
| protein apag | ALO56_01174 | Q88A47 | Positive | 1895570 - 1895950 | 13824.3 |
| bis-tetraphosphatase, symmetrical | ALO56_01175 | Q48NT9 | Positive | 1895950 - 1896852 | 33771.3 |
| thiosulfate sulfurtransferase glpe | ALO56_01176 | Q48NU0 | Positive | 1896849 - 1897172 | 11725.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









