Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00211 | Not Available | Positive | 1873141 - 1874055 | 33711.6 |
| uncharacterized protein | ALO56_00212 | Not Available | Negative | 1874107 - 1874787 | 26066.7 |
| anthranilate synthase component i | ALO56_01161 | P21689 | Negative | 1875024 - 1876511 | 54829.0 |
| phosphoglycolate phosphatase | ALO56_01162 | Q4ZMI2 | Negative | 1876576 - 1877394 | 30239.1 |
| ribulose-phosphate 3-epimerase | ALO56_01163 | P44756 | Negative | 1877391 - 1878065 | 24243.3 |
| binding-protein-dependent transport system inner membrane protein | ALO56_01164 | P9WG00 | Negative | 1878161 - 1879048 | 31743.8 |
| polyamine abc transporter permease | ALO56_04580 | Not Available | Negative | 1879060 - 1880322 | 46566.8 |
| polyamine abc transporter periplasmic polyamine-binding protein | ALO56_01166 | Q9I6R6 | Negative | 1880386 - 1881420 | 37612.6 |
| polyamine abc transporter atp-binding protein | ALO56_04582 | Not Available | Negative | 1881503 - 1882702 | 44144.5 |
| luxr family dna-binding response regulator | ALO56_01168 | P66798 | Negative | 1882926 - 1883555 | 22835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









