Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00201 | Not Available | Positive | 1860122 - 1860421 | 11118.6 |
| cobalamin synthesis protein/p47k family protein | ALO56_00202 | P29937 | Positive | 1860418 - 1861437 | 36931.8 |
| abc transporter binding protein | ALO56_00203 | Not Available | Positive | 1861434 - 1862630 | 44525.8 |
| glucose dehydrogenase | ALO56_04374 | Not Available | Negative | 1863049 - 1865574 | 90281.0 |
| carbohydrate-selective porin oprb | ALO56_00205 | Not Available | Negative | 1865602 - 1867032 | 52911.7 |
| uncharacterized protein | ALO56_00206 | Q5E7H1 | Positive | 1867230 - 1867505 | 10704.9 |
| uncharacterized protein | ALO56_00207 | Not Available | Positive | 1867548 - 1868207 | 24917.2 |
| iron utilization protein | ALO56_04375 | Q46871 | Negative | 1868259 - 1869137 | 32784.1 |
| uncharacterized protein | ALO56_00209 | P64588 | Negative | 1869038 - 1869628 | 21863.0 |
| uncharacterized protein | ALO56_04377 | Not Available | Negative | 1869709 - 1872828 | 115939.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









