Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | ALO56_03632 | Q7AH43 | Positive | 1848277 - 1849308 | 37098.9 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALO56_03633 | D5V0N9 | Positive | 1849334 - 1850167 | 31058.1 |
| methyl-accepting chemotaxis protein | ALO56_01657 | Q88JK6 | Negative | 1850783 - 1852423 | 57953.9 |
| gnat family acetyltransferase | ALO56_01658 | Not Available | Negative | 1852606 - 1853319 | 26533.0 |
| catalase | ALO56_01659 | P46206 | Positive | 1853920 - 1855452 | 56647.7 |
| uncharacterized protein | ALO56_00196 | Not Available | Positive | 1855502 - 1855907 | 14208.5 |
| polysaccharide deacetylase | ALO56_00197 | B5ZA76 | Positive | 1855947 - 1856876 | 35549.2 |
| major facilitator family transporter | ALO56_00198 | Not Available | Positive | 1856904 - 1858244 | 47646.5 |
| short-chain dehydrogenase/reductase sdr | ALO56_00199 | Q9X248 | Positive | 1858255 - 1859016 | 26545.8 |
| short chain dehydrogenase/reductase family oxidoreductase | ALO56_00200 | O67610 | Positive | 1859281 - 1860099 | 28410.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









