Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease | ALO56_05092 | Not Available | Negative | 1835696 - 1836394 | 26281.5 |
| cyclic nucleotide-binding protein | ALO56_03623 | Not Available | Negative | 1836384 - 1838351 | 73490.1 |
| response regulator receiver | ALO56_03624 | Not Available | Positive | 1838548 - 1838991 | 16512.0 |
| malate synthase g | ALO56_05093 | Q88AB2 | Negative | 1839044 - 1841350 | 83770.7 |
| act domain-containing protein | ALO56_03626 | Not Available | Positive | 1841533 - 1842060 | 18995.0 |
| rard protein | ALO56_05094 | Q9I633 | Negative | 1842274 - 1843161 | 32706.8 |
| serine/threonine protein kinase | ALO56_05095 | P0C0K4 | Negative | 1843445 - 1844500 | 40018.9 |
| periplasmic binding protein/laci transcriptional regulator | ALO56_03629 | B6EH86 | Positive | 1844616 - 1845635 | 36835.4 |
| extracellular solute-binding protein | ALO56_03630 | Not Available | Positive | 1845619 - 1846620 | 35818.9 |
| binding-protein dependent transport system inner membrane protein | ALO56_03631 | P56343 | Positive | 1846620 - 1847489 | 30267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









