Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO56_01577 | P0ACR7 | Positive | 1828500 - 1829372 | 32097.0 |
| hypothetical protein | ALO56_01578 | Not Available | Positive | 1829465 - 1829707 | 9007.11 |
| uncharacterized protein | ALO56_01579 | Not Available | Negative | 1829965 - 1830687 | 27106.1 |
| uncharacterized protein | ALO56_01580 | Not Available | Negative | 1830684 - 1831115 | 16183.5 |
| uncharacterized protein | ALO56_01581 | Not Available | Negative | 1831121 - 1831288 | 6006.19 |
| uncharacterized protein | ALO56_01582 | Not Available | Negative | 1831410 - 1832270 | 31085.2 |
| uncharacterized protein | ALO56_01583 | Not Available | Negative | 1832403 - 1832645 | 9228.92 |
| putative metallo-beta-lactamase | ALO56_01584 | P9WLD6 | Positive | 1833680 - 1834543 | 32515.4 |
| amino acid permease | ALO56_04681 | Not Available | Positive | 1834647 - 1835016 | 12466.6 |
| gntr family transcriptional regulator | ALO56_04771 | O05494 | Positive | 1835178 - 1835695 | 19214.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









