Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion component | ALO56_04679 | P33212 | Negative | 1816415 - 1817026 | 22317.5 |
| uncharacterized protein | ALO56_04678 | Not Available | Positive | 1816983 - 1817972 | 35798.1 |
| uncharacterized protein | ALO56_01569 | Not Available | Negative | 1817975 - 1818391 | 15077.9 |
| type iii secretion component | ALO56_01570 | P55702 | Negative | 1818404 - 1819720 | 45835.8 |
| type iii secretion component | ALO56_01571 | A1JU76 | Negative | 1819717 - 1821861 | 77986.7 |
| type iii secretion component | ALO56_01572 | Not Available | Negative | 1821858 - 1822196 | 12365.0 |
| uncharacterized protein | ALO56_01573 | Not Available | Negative | 1822193 - 1822552 | 13443.2 |
| uncharacterized protein | ALO56_01574 | Not Available | Negative | 1823637 - 1823798 | 5614.59 |
| uncharacterized protein | ALO56_01575 | Not Available | Positive | 1824399 - 1827878 | 124047.0 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | ALO56_01576 | Not Available | Negative | 1827940 - 1828365 | 16080.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









