Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion component | ALO56_01559 | P55723 | Negative | 1808021 - 1809067 | 38077.3 |
| type iii secretion component | ALO56_01560 | P55722 | Negative | 1809067 - 1809882 | 29340.2 |
| type iii secretion component | ALO56_01561 | Not Available | Negative | 1809889 - 1810158 | 9405.98 |
| putative type iii secretion component | ALO56_101211 | P55720 | Negative | 1810163 - 1810819 | 24020.0 |
| uncharacterized protein | ALO56_01562 | Not Available | Negative | 1811856 - 1812368 | 19417.2 |
| type iii secretion component | ALO56_04677 | Q7ARI8 | Negative | 1812418 - 1813881 | 52853.0 |
| type iii secretion component | ALO56_01564 | Not Available | Negative | 1813739 - 1814335 | 21785.6 |
| type iii secretion component | ALO56_01565 | P55714 | Negative | 1814954 - 1815733 | 27897.2 |
| uncharacterized protein | ALO56_01566 | Not Available | Negative | 1815737 - 1816168 | 14760.3 |
| uncharacterized protein | ALO56_01567 | Not Available | Negative | 1816178 - 1816396 | 7708.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









