Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator gntr | ALO56_03065 | Not Available | Positive | 1797928 - 1798680 | 27565.9 |
| major facilitator superfamily transporter | ALO56_03066 | Q9I2B6 | Negative | 1798688 - 1799923 | 42739.6 |
| uncharacterized protein | ALO56_03067 | Not Available | Negative | 1800087 - 1800347 | 9375.02 |
| hypothetical protein | ALO56_101009 | Not Available | Negative | 1800354 - 1800617 | 9458.35 |
| aromatic amino acid aminotransferase | ALO56_03068 | P43336 | Negative | 1800918 - 1802114 | 43562.0 |
| putative pterin-4-alpha-carbinolamine dehydratase | ALO56_03069 | Q4ZQG4 | Negative | 1802114 - 1802470 | 13361.9 |
| phenylalanine 4-monooxygenase | ALO56_04988 | P43334 | Negative | 1802510 - 1803373 | 32883.5 |
| helix-turn-helix, fis-type | ALO56_03071 | P07604 | Positive | 1803581 - 1805140 | 57131.4 |
| uncharacterized protein | ALO56_03072 | Not Available | Negative | 1805248 - 1805514 | 9555.53 |
| acetyl-coenzyme a synthetase | ALO56_03073 | Q885K7 | Positive | 1805854 - 1807809 | 71614.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









