Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconolactonase | ALO56_01297 | P0DOV6 | Negative | 1786555 - 1787439 | 31914.7 |
| uncharacterized protein | ALO56_01298 | Q888H1 | Negative | 1787484 - 1788311 | 30430.8 |
| outer membrane porin | ALO56_01299 | Not Available | Negative | 1788490 - 1789758 | 46524.4 |
| short-chain dehydrogenase | ALO56_01300 | P46331 | Positive | 1790239 - 1791003 | 26838.9 |
| uncharacterized protein | ALO56_03059 | Not Available | Negative | 1791282 - 1792160 | 33123.6 |
| uncharacterized protein | ALO56_03060 | Not Available | Negative | 1792447 - 1793730 | 46737.1 |
| ureidoglycolate lyase | ALO56_03061 | Q48KS5 | Negative | 1793759 - 1794283 | 19491.2 |
| putative allantoicase | ALO56_04987 | Q87YX4 | Negative | 1794557 - 1795768 | 45276.4 |
| uncharacterized protein | ALO56_03063 | D8JBB8 | Negative | 1795569 - 1796108 | 19589.2 |
| polysaccharide deacetylase | ALO56_03064 | O13842 | Negative | 1796105 - 1797034 | 35744.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









