Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver | ALO56_01287 | Not Available | Positive | 1776754 - 1777761 | 35919.8 |
| sensory box protein | ALO56_01288 | Not Available | Positive | 1777766 - 1778245 | 18239.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ALO56_01289 | Q48N21 | Positive | 1778341 - 1779597 | 43521.3 |
| transcriptional activator chrr | ALO56_01290 | P40685 | Negative | 1779620 - 1780276 | 23706.8 |
| rna polymerase sigma factor rpoe | ALO56_01291 | Q3IYV6 | Negative | 1780276 - 1780884 | 23464.0 |
| uncharacterized protein | ALO56_01292 | Not Available | Positive | 1781085 - 1781654 | 20346.4 |
| membrane protein | ALO56_01293 | Not Available | Negative | 1782508 - 1783488 | 34655.4 |
| trap dicarboxylate transporter subunit dctm | ALO56_01294 | P40800 | Negative | 1783579 - 1784859 | 45074.6 |
| tripartite atp-independent periplasmic transporter dctq | ALO56_01295 | Not Available | Negative | 1784860 - 1785387 | 19209.4 |
| trap dicarboxylate transporter subunit dctp | ALO56_01296 | Q1QUN2 | Negative | 1785451 - 1786473 | 37437.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









