Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | ALO56_01278 | Not Available | Negative | 1767086 - 1767649 | 20419.8 |
| tonb system transport protein | ALO56_01279 | Not Available | Positive | 1767836 - 1768243 | 14774.4 |
| uncharacterized protein | ALO56_01280 | Not Available | Positive | 1768245 - 1769009 | 27535.4 |
| tonb-dependent receptor | ALO56_01281 | Q9HUX3 | Positive | 1769027 - 1771309 | 83705.2 |
| mota/tolq/exbb proton channel family protein | ALO56_01282 | Not Available | Positive | 1771335 - 1771985 | 23454.6 |
| phospholipase d | ALO56_01283 | Q8BG07 | Positive | 1772048 - 1773295 | 45617.6 |
| dps family protein | ALO56_04607 | Not Available | Negative | 1773371 - 1773886 | 19574.5 |
| mlta domain-containing protein | ALO56_01285 | Not Available | Positive | 1774013 - 1775227 | 43614.1 |
| uncharacterized protein | ALO56_01286 | Q7N4H9 | Negative | 1775522 - 1775995 | 17124.6 |
| putative toxin-antitoxin system antitoxin component | ALO56_100390 | Q7N4I0 | Negative | 1775992 - 1776441 | 16931.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









