Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formamidase | ALO56_01268 | Q4ZXA2 | Negative | 1754809 - 1755834 | 37482.7 |
| abc transporter permease | ALO56_01269 | D4GPW1 | Negative | 1755859 - 1756779 | 31662.3 |
| inner-membrane translocator | ALO56_01270 | Not Available | Negative | 1756772 - 1757881 | 38651.8 |
| twin-arginine translocation pathway signal | ALO56_01271 | Not Available | Negative | 1757892 - 1759001 | 39480.6 |
| allophanate hydrolase | ALO56_01272 | Not Available | Negative | 1759017 - 1760837 | 64218.4 |
| uncharacterized protein | ALO56_01273 | Not Available | Positive | 1761074 - 1761874 | 29674.4 |
| nad dependent epimerase/dehydratase | ALO56_01274 | Q9JRN7 | Negative | 1761972 - 1762868 | 32385.8 |
| gdp-mannose 4,6-dehydratase | ALO56_01275 | Q9JRN5 | Negative | 1762868 - 1763899 | 38616.2 |
| methyl-accepting chemotaxis protein | ALO56_01276 | Q9I3S1 | Positive | 1764162 - 1765475 | 47857.8 |
| phosphodiesterase/alkaline phosphatase d | ALO56_04606 | P42251 | Negative | 1765522 - 1767114 | 59206.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









