Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03884 | Not Available | Negative | 1741617 - 1741790 | 6245.84 |
| cytochrome d ubiquinol oxidase subunit ii | ALO56_03885 | P26458 | Negative | 1741806 - 1742813 | 37103.4 |
| cytochrome d ubiquinol oxidase subunit i | ALO56_03886 | P26459 | Negative | 1742817 - 1744256 | 53428.6 |
| choline/carnitine/betaine transporter | ALO56_01261 | Q87NZ5 | Positive | 1744856 - 1746550 | 60540.0 |
| uncharacterized protein | ALO56_01262 | Not Available | Negative | 1747337 - 1749214 | 69896.8 |
| na antiporter nhaa | ALO56_01263 | A6SWX0 | Negative | 1749311 - 1750657 | 47513.4 |
| gntr family transcriptional regulator | ALO56_01264 | Not Available | Negative | 1750836 - 1751522 | 26907.2 |
| uncharacterized protein | ALO56_01265 | Not Available | Negative | 1751528 - 1751914 | 14376.9 |
| isochorismatase hydrolase | ALO56_01266 | Q1M7F4 | Negative | 1751914 - 1752591 | 24020.0 |
| abc transporter | ALO56_01267 | D4GPW3 | Negative | 1752588 - 1754123 | 56099.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









