Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, tetr | ALO56_04329 | Not Available | Positive | 86643 - 87287 | 23734.6 |
| uncharacterized protein | ALO56_04330 | Not Available | Positive | 87646 - 88974 | 46629.6 |
| transporter | ALO56_04331 | Not Available | Negative | 89106 - 89321 | 7628.36 |
| aliphatic sulfonates import atp-binding protein ssub | ALO56_04332 | Q48CA0 | Negative | 89349 - 90161 | 29264.8 |
| aliphatic sulfonates abc transporter permease | ALO56_04333 | P75851 | Negative | 90158 - 90955 | 28510.6 |
| hypothetical protein | ALO56_200026 | E1W9W8 | Positive | 92634 - 93605 | 33810.6 |
| hypothetical protein | ALO56_200161 | Not Available | Positive | 93779 - 94093 | 11070.4 |
| hypothetical protein | ALO56_200174 | B6QG01 | Negative | 94118 - 95926 | 65841.6 |
| hypothetical protein | ALO56_200173 | B7UWH7 | Negative | 95984 - 97162 | 41020.9 |
| hypothetical protein | ALO56_200040 | Not Available | Positive | 98129 - 98929 | 30293.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









