Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator family transporter | ALO56_03876 | Not Available | Positive | 1731321 - 1732484 | 41328.6 |
| gtp-binding protein yjia | ALO56_100090 | P24203 | Negative | 1732519 - 1733583 | 39377.7 |
| uncharacterized protein | ALO56_03877 | P0AAT0 | Negative | 1733593 - 1733790 | 7584.14 |
| carbon starvation protein csta | ALO56_05134 | P39396 | Negative | 1733818 - 1734192 | 13732.2 |
| cyclic diguanosine monophosphate-binding protein | ALO56_03878 | Q9HVI1 | Positive | 1736178 - 1736546 | 14082.8 |
| dna repair protein rada | ALO56_05135 | P96963 | Negative | 1736553 - 1737971 | 50667.7 |
| large-conductance mechanosensitive channel | ALO56_03880 | Q48DU1 | Positive | 1738113 - 1738559 | 15647.5 |
| oxidoreductase fad/nad-binding:oxidoreductase fad-binding region | ALO56_03881 | Q44532 | Negative | 1738914 - 1739690 | 29574.5 |
| luxr family transcriptional regulator | ALO56_03882 | Not Available | Positive | 1740020 - 1740265 | 8756.8 |
| ribosomal rna large subunit methyltransferase g | ALO56_03883 | Q48DT7 | Positive | 1740397 - 1741521 | 40730.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









