Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_100163 | Not Available | Positive | 1717844 - 1718434 | 20858.8 |
| uncharacterized protein | ALO56_03867 | Not Available | Positive | 1718496 - 1720349 | 70022.9 |
| lipoprotein | ALO56_03868 | Not Available | Positive | 1720537 - 1720890 | 13070.2 |
| transcription elongation factor greb | ALO56_03869 | A5V3E1 | Positive | 1720970 - 1721470 | 18185.1 |
| abc transporter atp-binding protein | ALO56_05133 | P45127 | Negative | 1721513 - 1723177 | 61456.9 |
| sensory box/ggdef domain/eal domain-containing protein | ALO56_03871 | Not Available | Positive | 1723561 - 1727397 | 144484.0 |
| serine hydroxymethyltransferase | ALO56_03872 | Q48DU7 | Positive | 1727772 - 1729025 | 44830.5 |
| uncharacterized protein | ALO56_03873 | Not Available | Positive | 1729129 - 1729698 | 20651.9 |
| unknown protein sequence | ALO56_03874 | Not Available | Negative | 1729868 - 1729972 | 4101.31 |
| uncharacterized protein | ALO56_03875 | Q31E54 | Positive | 1730075 - 1731307 | 44887.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









