Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00598 | D4GYY1 | Negative | 1670334 - 1671230 | 33070.3 |
| arac family transcriptional regulator | ALO56_04468 | P76241 | Negative | 1671440 - 1672243 | 29670.4 |
| transporter | ALO56_00600 | P39879 | Positive | 1672328 - 1673356 | 37000.5 |
| uncharacterized protein | ALO56_00601 | Not Available | Negative | 1673364 - 1674815 | 53943.0 |
| acetyl-coa acetyltransferase | ALO56_04469 | Q5QXN5 | Negative | 1675233 - 1676621 | 49774.6 |
| 3-ketoacyl- reductase | ALO56_00603 | I6Y778 | Positive | 1676620 - 1677975 | 48084.8 |
| acyl dehydratase | ALO56_00604 | Not Available | Positive | 1678003 - 1678863 | 31853.5 |
| uncharacterized protein | ALO56_00605 | Not Available | Positive | 1679127 - 1679453 | 12659.2 |
| smta protein | ALO56_100161 | Q8XDG3 | Positive | 1679450 - 1680199 | 28387.3 |
| lipoprotein | ALO56_00606 | Not Available | Positive | 1680219 - 1680842 | 22821.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









