Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ALO56_01616 | Not Available | Positive | 1662242 - 1662961 | 26474.7 |
| asp/glu racemase | ALO56_01617 | Q00924 | Positive | 1662972 - 1663703 | 25509.9 |
| uncharacterized protein | ALO56_01618 | Not Available | Negative | 1663866 - 1664090 | 7909.69 |
| zinc-containing alcohol dehydrogenase superfamily protein | ALO56_04684 | P77316 | Negative | 1664109 - 1665386 | 45529.6 |
| uncharacterized protein | ALO56_01620 | P21362 | Positive | 1665597 - 1666112 | 18871.5 |
| regulatory protein lysr | ALO56_01621 | Not Available | Negative | 1666264 - 1667169 | 33244.6 |
| serine acetyltransferase | ALO56_01622 | Q9US33 | Positive | 1667275 - 1668039 | 27030.4 |
| uncharacterized protein | ALO56_01623 | Not Available | Positive | 1668058 - 1668948 | 32544.8 |
| 3-hydroxyisobutyrate dehydrogenase | ALO56_01624 | Q0QLF5 | Positive | 1668954 - 1669853 | 30634.1 |
| aldehyde dehydrogenase | ALO56_04685 | Not Available | Positive | 1669998 - 1670208 | 7743.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









