Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs family protein | ALO56_00641 | E0SGL7 | Positive | 1644629 - 1649599 | 186389.0 |
| uncharacterized protein | ALO56_00642 | Not Available | Positive | 1651017 - 1652549 | 56661.9 |
| alpha-l-glutamate ligase-like protein | ALO56_00643 | Not Available | Positive | 1652549 - 1653532 | 36222.8 |
| orf54 | ALO56_04809 | Not Available | Positive | 1653647 - 1654005 | 13189.5 |
| lysr family transcriptional regulator | ALO56_01610 | P52696 | Negative | 1654111 - 1655001 | 33243.4 |
| uncharacterized protein | ALO56_01611 | P0AAV9 | Positive | 1655169 - 1656251 | 37450.2 |
| aerobic c4-dicarboxylate transporter | ALO56_01612 | C1D8S5 | Positive | 1656311 - 1657615 | 46283.9 |
| putative citrate transporter | ALO56_01613 | O05407 | Positive | 1657733 - 1659037 | 45942.6 |
| porin | ALO56_01614 | Not Available | Positive | 1659117 - 1660373 | 45808.9 |
| cytosine/purine uracil thiamine allantoin permease | ALO56_04683 | P94575 | Negative | 1660444 - 1661997 | 56706.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









