Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpb protein | ALO56_04480 | Not Available | Negative | 1629152 - 1631803 | 96311.8 |
| uncharacterized protein | ALO56_00632 | Not Available | Negative | 1632785 - 1634572 | 67927.8 |
| uncharacterized protein | ALO56_00633 | Not Available | Negative | 1635020 - 1635415 | 15026.8 |
| uncharacterized protein | ALO56_00634 | Not Available | Negative | 1636393 - 1636800 | 14912.7 |
| uncharacterized protein | ALO56_00635 | Not Available | Negative | 1636814 - 1638292 | 55775.0 |
| uncharacterized protein | ALO56_00636 | Not Available | Negative | 1638321 - 1638827 | 18678.5 |
| uncharacterized protein | ALO56_00637 | Not Available | Negative | 1638860 - 1640416 | 58599.7 |
| secreted protein hcp | ALO56_00638 | Q9HI36 | Positive | 1641205 - 1641723 | 19058.2 |
| rhs element vgr protein | ALO56_00639 | Not Available | Positive | 1641857 - 1643899 | 76073.3 |
| uncharacterized protein | ALO56_00640 | Not Available | Positive | 1643889 - 1644632 | 28234.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









