Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | ALO56_05234 | Not Available | Negative | 75342 - 76234 | 31891.5 |
| ribose-5-phosphate isomerase a | ALO56_05235 | Q48CC1 | Positive | 76146 - 76994 | 30025.2 |
| dna-binding protein | ALO56_101168 | Not Available | Negative | 77065 - 77973 | 33885.2 |
| sdia-regulated family protein | ALO56_100140 | Not Available | Negative | 78083 - 79015 | 34603.5 |
| fumarylacetoacetate hydrolase family protein | ALO56_04323 | P76004 | Negative | 79196 - 79861 | 23659.7 |
| oxidoreductase, fad-binding protein | ALO56_04324 | A4VGK4 | Negative | 79934 - 81352 | 52451.8 |
| d-3-phosphoglycerate dehydrogenase | ALO56_04325 | P0A9T2 | Positive | 81490 - 82719 | 44266.5 |
| asnc family transcriptional regulator | ALO56_04326 | E1V7V9 | Negative | 82778 - 83266 | 18497.5 |
| uncharacterized protein | ALO56_04327 | Not Available | Negative | 83314 - 83979 | 24616.7 |
| 4-aminobutyrate aminotransferase | ALO56_04328 | P22256 | Negative | 84050 - 85354 | 46797.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









