Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03020 | P0A1S9 | Negative | 1585444 - 1585818 | 14192.4 |
| cyclic nucleotide-binding protein | ALO56_03021 | Not Available | Negative | 1585885 - 1586361 | 17138.8 |
| oligopeptidase b | ALO56_04972 | P24555 | Negative | 1586444 - 1588573 | 79473.1 |
| uncharacterized protein | ALO56_04973 | Not Available | Positive | 1588600 - 1589121 | 19171.3 |
| uncharacterized protein | ALO56_04974 | Q47147 | Positive | 1589192 - 1589986 | 29498.2 |
| uncharacterized protein | ALO56_03025 | Not Available | Positive | 1590020 - 1590550 | 20189.4 |
| uncharacterized protein | ALO56_03026 | Not Available | Negative | 1590718 - 1591440 | 27843.6 |
| vwa containing coxe family protein | ALO56_03027 | Not Available | Negative | 1591635 - 1592813 | 45564.4 |
| atpase aaa | ALO56_03028 | Not Available | Negative | 1592853 - 1593698 | 32186.9 |
| uncharacterized protein | ALO56_04975 | Not Available | Positive | 1594119 - 1594613 | 18203.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









