Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03011 | P30845 | Positive | 1575933 - 1577573 | 61064.1 |
| ribonuclease d | ALO56_03012 | A6V8R6 | Positive | 1577715 - 1578848 | 42672.4 |
| ycgl domain-containing protein | ALO56_03013 | Q48LC5 | Positive | 1578845 - 1579138 | 11378.8 |
| d-isomer specific 2-hydroxyacid dehydrogenase | ALO56_03014 | A8GD46 | Positive | 1579209 - 1580090 | 32315.8 |
| nitroreductase family protein | ALO56_04968 | Not Available | Negative | 1580235 - 1580891 | 24255.4 |
| hypothetical protein | ALO56_04969 | Q87Y85 | Positive | 1580870 - 1581490 | 23355.8 |
| uncharacterized protein | ALO56_03016 | Not Available | Negative | 1581495 - 1581875 | 13263.0 |
| uncharacterized protein | ALO56_03017 | Not Available | Negative | 1581953 - 1582453 | 18334.9 |
| copper resistance protein b | ALO56_03018 | P59572 | Negative | 1582503 - 1583396 | 32387.8 |
| copper resistance protein a | ALO56_04971 | P59571 | Negative | 1583393 - 1585225 | 68133.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









