Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter permease | ALO56_03001 | P0AGI6 | Negative | 1563469 - 1564605 | 39984.3 |
| xylose import atp-binding protein xylg | ALO56_03002 | Q48J74 | Negative | 1564606 - 1566162 | 56448.8 |
| protein xylf | ALO56_03003 | P37387 | Negative | 1566261 - 1567262 | 36015.3 |
| xylose isomerase | ALO56_04965 | Q3KDW0 | Negative | 1567432 - 1568829 | 52267.7 |
| xylose operon regulatory protein | ALO56_04966 | P0ACI5 | Positive | 1568853 - 1570106 | 46011.5 |
| gluconate transporter | ALO56_04967 | Not Available | Negative | 1570141 - 1571592 | 50071.4 |
| gas vesicle protein | ALO56_03007 | Not Available | Positive | 1571843 - 1572313 | 17150.2 |
| catalase | ALO56_03008 | Not Available | Negative | 1572381 - 1572947 | 20751.7 |
| had family hydrolase | ALO56_03009 | Not Available | Negative | 1573060 - 1573767 | 24913.7 |
| nad-dependent malic enzyme | ALO56_03010 | Q48LC8 | Positive | 1574002 - 1575693 | 62127.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









