Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | ALO56_02993 | Q4ZW75 | Positive | 1553480 - 1554358 | 31218.8 |
| lipoprotein | ALO56_02994 | Q3SJU7 | Positive | 1554359 - 1555495 | 41330.3 |
| beta-lactamase-like protein | ALO56_02995 | C0SP91 | Positive | 1555496 - 1556254 | 27735.2 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | ALO56_02996 | Q48LD2 | Positive | 1556283 - 1556993 | 26966.5 |
| Trna-ser | Not Available | Not Available | Positive | 1557086 - 1557175 | Not Available |
| hypothetical protein | ALO56_02997 | Not Available | Negative | 1560807 - 1561589 | 27881.5 |
| hypothetical protein | ALO56_101227 | Not Available | Negative | 1561600 - 1562145 | 18350.4 |
| uncharacterized protein | ALO56_02998 | Not Available | Positive | 1562437 - 1562640 | 7473.96 |
| toxin-antitoxin antitoxin component | ALO56_02999 | Q8ECH6 | Positive | 1562715 - 1563170 | 17235.9 |
| antitoxin ygit | ALO56_03000 | Not Available | Positive | 1563201 - 1563413 | 7550.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









