Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthetase | ALO56_02975 | B3QUT2 | Negative | 1532468 - 1533358 | 31995.7 |
| s ii aldolase/adducin domain protein | ALO56_02976 | Q20952 | Negative | 1533402 - 1534178 | 28302.1 |
| putative transcriptional regulator | ALO56_02977 | Not Available | Positive | 1534311 - 1534847 | 19587.7 |
| uncharacterized protein | ALO56_02978 | Not Available | Positive | 1536406 - 1536849 | 16818.1 |
| exopolysaccharide inner membrane protein | ALO56_02979 | Not Available | Positive | 1536893 - 1538122 | 46517.0 |
| uncharacterized protein | ALO56_04962 | Not Available | Negative | 1538312 - 1538749 | 16390.7 |
| catalase-peroxidase | ALO56_02980 | Q48E42 | Negative | 1538724 - 1540994 | 82447.6 |
| uncharacterized protein | ALO56_02981 | Not Available | Negative | 1541280 - 1542182 | 33475.0 |
| 4-oxalocrotonate tautomerase | ALO56_02982 | P94502 | Negative | 1542493 - 1542882 | 14293.3 |
| 2-nitropropane dioxygenase npd | ALO56_02983 | D0V3Y4 | Negative | 1542913 - 1543977 | 37867.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









