Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel | ALO56_02967 | P50598 | Positive | 1524595 - 1525290 | 25319.3 |
| biopolymer transporter tolr | ALO56_02968 | Not Available | Positive | 1525305 - 1525769 | 16737.6 |
| tola protein | ALO56_02969 | P50600 | Positive | 1525769 - 1526839 | 38577.4 |
| protein tolb | ALO56_100289 | Q48FD0 | Positive | 1526836 - 1528137 | 47649.7 |
| peptidoglycan-associated lipoprotein | ALO56_02970 | P0A138 | Positive | 1528190 - 1528687 | 17677.8 |
| tol-pal system protein ybgf | ALO56_02971 | P0A130 | Positive | 1528886 - 1529509 | 22578.5 |
| 7-carboxy-7-deazaguanine synthase | ALO56_02972 | Q1IHK7 | Positive | 1529683 - 1530330 | 24218.9 |
| 7-cyano-7-deazaguanine synthase | ALO56_02973 | Q4ZWK2 | Positive | 1530332 - 1531021 | 24261.8 |
| Trna-lys | Not Available | Not Available | Positive | 1531085 - 1531160 | Not Available |
| glutamine amidotransferase | ALO56_02974 | P40194 | Negative | 1531620 - 1532375 | 27741.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









