Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein slyx -like protein | ALO56_02957 | Q4ZWL9 | Positive | 1516174 - 1516380 | 8080.52 |
| cold-shock dna-binding domain-containing protein | ALO56_02958 | P95459 | Negative | 1516440 - 1517045 | 21886.0 |
| dps family protein | ALO56_02959 | P73321 | Positive | 1517505 - 1517978 | 17788.3 |
| uncharacterized protein | ALO56_02960 | Not Available | Positive | 1518306 - 1518650 | 12800.5 |
| aspartate--trna ligase | ALO56_02961 | Q4ZWL5 | Positive | 1518940 - 1520715 | 66386.6 |
| putative transcriptional regulatory protein | ALO56_02962 | Q4ZWL4 | Positive | 1520829 - 1521575 | 26581.1 |
| crossover junction endodeoxyribonuclease ruvc | ALO56_02963 | Q48FC3 | Positive | 1521704 - 1522228 | 18504.7 |
| holliday junction atp-dependent dna helicase ruva | ALO56_02964 | Q48FC4 | Positive | 1522335 - 1522943 | 22184.0 |
| holliday junction atp-dependent dna helicase ruvb | ALO56_02965 | Q48FC5 | Positive | 1522944 - 1524002 | 39037.0 |
| uncharacterized protein | ALO56_02966 | P0A8Z5 | Positive | 1524138 - 1524605 | 17430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









