Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase rimo | ALO56_04955 | Q4ZWM9 | Negative | 1500328 - 1501689 | 50479.9 |
| transcriptional regulator, xre family | ALO56_100505 | Not Available | Positive | 1502254 - 1502577 | 11608.2 |
| putative potassium transport system protein kup | ALO56_100057 | Q4ZWM7 | Positive | 1502791 - 1504686 | 68498.4 |
| uncharacterized protein | ALO56_04956 | Not Available | Negative | 1504767 - 1506113 | 48424.9 |
| uncharacterized protein | ALO56_04958 | Q4L667 | Negative | 1506098 - 1508743 | 96494.9 |
| dna polymerase iv | ALO56_02952 | Q4ZWM4 | Positive | 1509427 - 1510488 | 39268.1 |
| lipoprotein | ALO56_02953 | Not Available | Negative | 1510522 - 1511478 | 35830.2 |
| proline--trna ligase | ALO56_04959 | Q48FB4 | Negative | 1511547 - 1513376 | 67505.9 |
| porin d | ALO56_04960 | Not Available | Negative | 1513434 - 1514819 | 49768.6 |
| histidine triad protein | ALO56_02956 | Not Available | Positive | 1515626 - 1516171 | 20598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









